Gene sequences

How To ▶︎

JA

EN

TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

Search

By Traits

Let’s Analyze!!

SNP Detection
(lang=JA only)

Other Tools

Data List

All

Trait-Related Loci

Nicotiana tabacum

CDS Sequence

CDS ID	lcl\|NW_015927898.1_cds_XP_016475589.1_67505
CDS Infomation	[gene=LOC107797231] [db_xref=GeneID:107797231] [protein=auxilin-like protein 1] [protein_id=XP_016475589.1] [location=complement(join(39194..39229,40240..40416,41212..41301,41383..41448,41542..41612,41745..41811,41883..45306,45904..46277))] [gbkey=CDS]
Sequence	ATGGAAAATCTCTCACATTCATTTGCTAAAAAGAGTTTCCACCATGGAAGCGGGTTTATT ACAACAGCAAGCAAGTCATTATACGACGACGTTTTTGGTGGCCCCCCGAAGTTCGGGGTA CCAACGCTAGCTCCTCGTTACGAGGATTATACTGAGATTTTCGGAGGTTTTCACTCTTCT CGTGCTTCCTCTATTCCCATTTTGGATCTTCCGGTTGTTGAGGACGAGGGTGATCAGGTG TCATTCGATGTACAGAGTTCTCATTTTGACTATTCTGAGATTTTCGGAGGGTTTAATGTT GTTGATTTTGCCCTTTCTTATGAGGATTTGGTTCGTCAGTCTACCTCTGGTTATGATTCT TCTGAAGAGGCCTGGAGTCCAGCTCAAAGTGAGAACCTGTCAGATGAATCAGATCCTTCT GCTTTTTCTGAAAGGAGTCAGAGCTCTTCTAGTGCTGATGTTCCTCATTCATCCGATGGC ATCAAGCAGTTCAACATTTCATATCACAAGACTTTCCAGAGGAGCGATGGCGTTGTATCA AATGGCATGACGCATGTAGCACATTTACATGCTATTCCCGGATATACTTACATGGTCAGT GGAAGTCAGGCTTCTCGAAGTCAAGAAGACACCGAGCCACAACCCCTTCAGGAAACTCTT GATCTCAAGCACAACGTGGACTTGAGTGGATCGGTTTTAGAAGAGAAGCGGTTCAAAAGA AGCACGTCACGAAGTATGAGCAGCAGTTATATCATTCATGGAATTAATTCAAAACTTCCG GAGACATGTAGTGAAGCTAGTTGTACTCCAGATAAGCCATTCTTAACTGTGTCAGATATC AGTTTAAGAACTAGGCCTTCAGGGTTGCCACCACCATCAAGACCGCCACCTGGCCTGGCT GCCAAGAAAGGAAACTCCGATAGACTGAATTCAAGACCCAAAGCTTCAAAAAGTTGTGCT TTTGAGCAAAAGCAAGGTGATAATTCACAATCTTACTTTGATGTGGACGTATATGCAAGT TCATCATCAGCAGCGTCTACTGCAGCTATAAAAGATGCAATGGAGAAGGCTCAAGCAAAG CTTAGAAGTGCAAAAGAGCTAATGGAGAGAAAGAAGCAAGATATAAAATGTTACTCAAAA CTCCATTTGGAGAATGGTATTTTGGAAGAAAGACCAAGCAAGACATTTGACAAAGATGAC ATGGCACAAAACATGCGTGTTGAAGAAATGGACGAAATCTTTAAGAATACCGAGGTTATT TCAGTTAATACTGAAGAAGAAAAACATTTCAAGTTTACTGGAAAAAGTGAAGAAAGTGAG CAGGGTAATCCTAATATGTCATCTCAACCATCATATAAAGCTGAAGGTAGAGTTGCATGG AGGGAAGGTGCAGAATTTTTTGAAGTAGTTGAAACTTACCCATCTTCTAGGTCTTCTGAG AAAGTCAAGAATGAATTTGGTTTGCTGAGAAATATTGAATCACATGAATACAGACAATTT GAAGCAACCATTGACAGACTTGACCATCCAGAAACTTGCAACAGTGTTGCAGCAAAGGAG GCTCTGGATACCGAAGAGGGAAGTGAAGAAAAGGTAGGTAAAGGGTCTTACCAATGGGGT ATTAAGCATCAAAGATCAAAAGAAGATTTGGGTTGTCAATTGGAGCATAAGGAGACAGTA AAAGCAGCAGAAAGCTTATCTGACGCTAGTACGAGTGAGAAACATGTTAAAGTGGAGCAG CAAGAGGGAACAAGTGAGACGCTAATCAGCACTTCTCATGAAAGCGTAGATGACAACAGA CGAGGTGATCAGAATGTGAGTGGTGGCAGTAGAAGATTAGATGATCAAAAGAGATTTATA AACATTGATGCTAGGCATATTGATATAAAGCTGATGGCAGAGTCTGAGATTGAAGAATCT GAGGGAGGGCTTAGTGATGATGAGGATGAAACAGGAAATGGACAGAGAGTAAATGATATA GTCAAGCAGGAAAGGAAGAAGCAACGTGATGCAGTTTCTGAAAGAGATGAAGGCTCTCTT CACCAGGAGGAGAATGCAACGAGCCCAAAGGAGGATTTTAGATCAGAAAAGAATGATGAG AATTTGGAGTTGGCTTGTAAACAAGAGAAGAATGAGAGAGACAAAGAGACCGATTTCAAG TGGGACCCAAAGGTTCAGGATGCAAAAGGTTCTTTTGGCTGGGTGCAAGAGGAGAGCCAA TTTAGAGTGGCTCTCGAGAAGAAAGAGCATGAAGGGGAACAAAATGAGCCTCATGAAGGA GAAGAAACTGAGAGAAGAGGGGATGGCGCATGTGAAGGAGAAGATGGTGATGTGGATATG ACTGAGGTATTGGAGCAGCAAAAGAGTAGGACGAAATCCCCTATGCGTTCCAAAGTAGAA TTTGAGAACATATCTGAAGAGTCCAGTGAGTTTGACGGAACTGAACAAGCAACTGCATGT GATGATAAGTGGGAAGAATTGCGTGAACAGACCGAAGATAGCGCGCCTATTGAGATGGTT GGATCTGTATTGAAGAACAACAATGTGGAAGTTCACACAGATGCTACGGCATTTCATTGG GCCCGCCAACAAAATGATGAGACTTTACGTGTGGACAGAATGTCTAAGAAGCTAGAGGAG AACGTTGGAAAGCTGGAAGCAACTCAATCAGCTCTTTCCCGCGAAGTAGATGAGAAATTG GAAACTGAGCTGCAAAATTGTGATAGAGAATCAGAAATTGGAGAGGCCAATCTGCTGCCT AAAGATGGATGCGACTCTGTTTGCAATAGACAAGATGTCTTGGGACATGTAAAAGACCAA ACCAGAAGAGCAGATGCAATATGGTCTACTTCTTCGAATGTGCCATTGACCAATTCAAGT GAAGCTGGTATTTGCATAGGTAAGGCGTCTGATAGAATGAAGAAGACATCACCTGAAATG GTAAATCATTCTGATCAAACAAATGTTACACCTCCTGAATGTCTGACAGCGAACATCAAT GGAGTTCAGTCTGGCACTAACCAGGAAATTACAGAGGAAAAGTTTACAGCTAATCACCCT GACCATAGGAATGGAACATATTCTGAGGGGGCAAGAATGAACTCCAAGGTTGTTCAGTCT GGCACTAACCAGGGAGTTACGGAAGAAAAGTTTACAGCTCATCAGGTTGCCAGGGAATGG GTCACAAACGCAAAGAAAATTGGAGATGCTTTGGCTGCTGTGCTAGAGGATGTTGAAGTA TTGTCAAGTACAGACCAGAGAACAGCAACTGGAGGTCCCCACAAGAAAGAGAGAAATTCA AATAAGATCATTACTCCTGAAGCACAAAAAATGGACGAAAGACTGACAAAAGAAAGAGAA TTGGAGGAAGAATATCTGAGAAAGTTAGAAGAAGAGAGGGAGAGAGAAAGAGAAAGAGAG AAGGATCGTATGTCTGTGACTCGTGAAGCTCTGGAAAGGTCATATCTTGAAGCCCGTGAG AGAGTAGAAAGAGCTTCCATGGAGAGAGCTACAACTGAAATACGACAAAGAACTATGGCG GAGGCCCGAGAAAGATTAGAGAAGGCATCTGCAGAGGCTAGGGAAAGATCTCTAGCAGAG CAGACATCTGTAGAGGCTAGGCTCAGGGCGGAGCGTGCTGCAGTAGAAAGAGCAACTGCA GAGGCTCGGCAACGAGCTTTCGAGAAAGCAATGGTTGAGAAGGCTATCCAGGAGTCACGT GAACGAGTGGAAAGATCATCTTCAGAAAAATTTTCTGCTTATTCTAGGACCAACGAAATG AGACAGAGCTCTTCTTCTGAACAACATGCGCATCATAGCACAGAAACCTCAAAATTGAGA TATTCATATTCTTCAGCTCATGCTGGCATTGAAGGTGAATCACCTCAACGATGTAAAGCT CGGTTGGAGAGGTACCGCAGAACATCTGAGCGTGCAGCTAAGGCCCTAGCAGAGAAAAAT ATGCGTGATCTTCTAGCTCAGAGGGAGCAAGCGGAGAGAAATAGATTGTCTGAAACTCTG GATGCTGAAGTGAAAAGGTGGTCAAGCGGGAAAGAAGGCAATCTACGTGCATTGCTTTCA ACTTTACAATACATTCTTGGGCCTAATAGCGGTTGGCAGCCAATTCCATTAACAGAAGTT ATAACTTCAGTAGCGGTGAAGAAAGCTTATAGGAAAGCTACTCTTTGTGTGCATCCTGAC AAATTACAACAGCGAGGTGCTAATATTCAGCAGAAGTATGTATGCGAGAAGGTCTTTGAT CTTTTAAAGGAAGCATGGAACAGGTTCAACTCTGAGGAGAGGTAG

Peptide Sequence

PEP ID	XP_016475589.1
PEP Infomation	PREDICTED: auxilin-like protein 1 [Nicotiana tabacum]
Sequence	MENLSHSFAKKSFHHGSGFITTASKSLYDDVFGGPPKFGVPTLAPRYEDYTEIFGGFHSS RASSIPILDLPVVEDEGDQVSFDVQSSHFDYSEIFGGFNVVDFALSYEDLVRQSTSGYDS SEEAWSPAQSENLSDESDPSAFSERSQSSSSADVPHSSDGIKQFNISYHKTFQRSDGVVS NGMTHVAHLHAIPGYTYMVSGSQASRSQEDTEPQPLQETLDLKHNVDLSGSVLEEKRFKR STSRSMSSSYIIHGINSKLPETCSEASCTPDKPFLTVSDISLRTRPSGLPPPSRPPPGLA AKKGNSDRLNSRPKASKSCAFEQKQGDNSQSYFDVDVYASSSSAASTAAIKDAMEKAQAK LRSAKELMERKKQDIKCYSKLHLENGILEERPSKTFDKDDMAQNMRVEEMDEIFKNTEVI SVNTEEEKHFKFTGKSEESEQGNPNMSSQPSYKAEGRVAWREGAEFFEVVETYPSSRSSE KVKNEFGLLRNIESHEYRQFEATIDRLDHPETCNSVAAKEALDTEEGSEEKVGKGSYQWG IKHQRSKEDLGCQLEHKETVKAAESLSDASTSEKHVKVEQQEGTSETLISTSHESVDDNR RGDQNVSGGSRRLDDQKRFINIDARHIDIKLMAESEIEESEGGLSDDEDETGNGQRVNDI VKQERKKQRDAVSERDEGSLHQEENATSPKEDFRSEKNDENLELACKQEKNERDKETDFK WDPKVQDAKGSFGWVQEESQFRVALEKKEHEGEQNEPHEGEETERRGDGACEGEDGDVDM TEVLEQQKSRTKSPMRSKVEFENISEESSEFDGTEQATACDDKWEELREQTEDSAPIEMV GSVLKNNNVEVHTDATAFHWARQQNDETLRVDRMSKKLEENVGKLEATQSALSREVDEKL ETELQNCDRESEIGEANLLPKDGCDSVCNRQDVLGHVKDQTRRADAIWSTSSNVPLTNSS EAGICIGKASDRMKKTSPEMVNHSDQTNVTPPECLTANINGVQSGTNQEITEEKFTANHP DHRNGTYSEGARMNSKVVQSGTNQGVTEEKFTAHQVAREWVTNAKKIGDALAAVLEDVEV LSSTDQRTATGGPHKKERNSNKIITPEAQKMDERLTKERELEEEYLRKLEEERERERERE KDRMSVTREALERSYLEARERVERASMERATTEIRQRTMAEARERLEKASAEARERSLAE QTSVEARLRAERAAVERATAEARQRAFEKAMVEKAIQESRERVERSSSEKFSAYSRTNEM RQSSSSEQHAHHSTETSKLRYSYSSAHAGIEGESPQRCKARLERYRRTSERAAKALAEKN MRDLLAQREQAERNRLSETLDAEVKRWSSGKEGNLRALLSTLQYILGPNSGWQPIPLTEV ITSVAVKKAYRKATLCVHPDKLQQRGANIQQKYVCEKVFDLLKEAWNRFNSEER

Transcript Sequence

Gene sequence data has not been registered.